BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB031F02LP1|AL429425
(981 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1411 1269 0.0
>3x_Contig1411
Length = 7271
Score = 1269 bits (637), Expect = 0.0
Identities = 756/787 (96%), Gaps = 8/787 (1%)
Strand = Plus / Minus
Query: 174 tgatcaagggaaagctgcttctatagcccactggtagcagtwtttgaatcgctctttctg 233
||||||||||||||||||||||||||||||||||||||||| | ||||||| ||||| ||
Sbjct: 7271 tgatcaagggaaagctgcttctatagcccactggtagcagtatgtgaatcgttctttttg 7212
Query: 234 atttaatagtaccggcggtggaggtgttatctggcgtcgaaactgccgttttttaattac 293
||| |||||||||||||||||||||||||||||||||||||||||| || | |||||
Sbjct: 7211 tttttttagtaccggcggtggaggtgttatctggcgtcgaaactgccggttgtgtattac 7152
Query: 294 gtataatgagggctgcgcaagtactttggaagaatggcacgactaagtcccaactcatga 353
||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 7151 gtataatgagg-ctgcgcaagttctttggaagaatggcacgactaagtcccaactcatga 7093
Query: 354 aggaggtcttcgccactgttaagaacaatccagcgcctgttaaaccagatgtacaacggc 413
||||||||||||||||||||||| |||||||||||||| | || | || | |||||||||
Sbjct: 7092 aggaggtcttcgccactgttaaggacaatccagcgcctttgaatctagttttacaacggc 7033
Query: 414 tcgctccggatacaaagttcctcgtttataggacgtacaatccgtctcttacaaaagatg 473
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 7032 tcgctccggatacaaagttcctcgtttataggacttacaatccgtctcttacaaaagatg 6973
Query: 474 attttcaatcgttggtatcgatgatcagtgataaggcaaaatcaaaggtattgatgaact 533
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6972 attttcaatcgttggtatcgatgatcagtgataaggcaaaatcaaaggtattgatgaact 6913
Query: 534 cttttgacgtgttcaagtatagagatcccaagttcttcacgtttctcgatcgtt-atata 592
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 6912 cttttgacgtgttcaagtatagagatcccaagttcttcacgtttctcgatcgtttatata 6853
Query: 593 ttgagattcccgactaatcatataatgaaagaatatttgatggcatcgcggttgagtctt 652
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6852 ttgagattcccgactaatcatataatgaaagaatatttgatggcatcgcggttgagtctt 6793
Query: 653 ttagatgacagagccgttaaattcaaggcaacagacgtggattccttgcagcwagattat 712
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 6792 ttagatgacagagccgttaaattcaaggcaacagacgtggattccttgcagcaagattat 6733
Query: 713 gctagatactatagaaacttggttaatgccagtaaatcagggaaagcttattttgatgaa 772
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6732 gctagatactatagaaacttggttaatgccagtaaatcagggaaagcttattttgatgaa 6673
Query: 773 gttaagaatcctgtacctaaagatttgtccgtgaactggtcacgtctacagacaatagaa 832
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6672 gttaagaatcctgtacctaaagatttgtccgtgaactggtcacgtctacagacaatagaa 6613
Query: 833 catagatcgcctttagtctggaa-ttaccagaaaactggga-cacctcaccgtctttaga 890
|||||||||| |||||||||||| ||||||||||||||||| ||||||||||||||||||
Sbjct: 6612 catagatcgcttttagtctggaatttaccagaaaactgggaccacctcaccgtctttaga 6553
Query: 891 aagttttggtggt-mgatatacatcacagc-tccaagtctttgtg-actatgaaagg-at 946
||||||||||||| ||||||||||||||| |||||||||||||| ||||||||||| ||
Sbjct: 6552 aagttttggtggtacgatatacatcacagcttccaagtctttgtgaactatgaaaggaat 6493
Query: 947 accaggt 953
|||||||
Sbjct: 6492 accaggt 6486
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6240
Number of Sequences: 1807
Number of extensions: 6240
Number of successful extensions: 55
Number of sequences better than 1.0e-20: 1
length of query: 981
length of database: 10,358,551
effective HSP length: 16
effective length of query: 965
effective length of database: 10,329,639
effective search space: 9968101635
effective search space used: 9968101635
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.1 bits)